Technical Manual for the mse FLR/a4a package

Iago MOSQUEIRA, (EC JRC)

Ernesto JARDIM (EC JRC)

17 February, 2020

## Warning: replacing previous import 'ggplot2::%+%' by 'FLCore::%+%' when loading
## 'ggplotFL'

Introduction

This is an introduction.

S4 classes

FLom

**FLom class**: Structure of the FLom class. Slot name followed by the slot class, in parenthesis.

FLom class: Structure of the FLom class. Slot name followed by the slot class, in parenthesis.

FLmse

**FLmse class**: Structure of the FLmse class. Slot name followed by the slot class, in parenthesis.

FLmse class: Structure of the FLmse class. Slot name followed by the slot class, in parenthesis.

FLoem

FLiem

mpCtrl

mseCtrl

Functions

mp()

Workflow of the mp() function.

Workflow of the mp() function.

performance()

Extending mse with your own functions

hcr

sa

More information

  • You can submit bug reports, questions or suggestions on mse at the mse issue page,1 or on the FLR mailing list.
  • Or send a pull request to https://github.com/flr/mse/
  • For more information on the FLR Project for Quantitative Fisheries Science in R, visit the FLR webpage.2
  • The latest version of mse can always be installed using the devtools package, by calling
    library(devtools)
    install_github('flr/mse')

Software Versions

  • R version 3.6.1 (2019-07-05)
  • FLCore: 2.6.14
  • mse: 2.0.3
  • Compiled: Tue Feb 18 11:37:43 2020
  • Git Hash: f397244

Author information

Iago MOSQUEIRA. WUR Ernesto JARDIM. European Commission Joint Research Centre. Ispra. Italy.

References

  1. https://github.com/flr/mse/issues↩

  2. http://flr-project.org↩