Recalculate to adjust abundances to F and M

An FLStock object is projected forward using the initial abundances and the total mortality-at-age per timestep. New values for the stock.n and catch.n slots are calculated, assuming that harvest and m are correct. This calculation provides a test of the internal consistency of the object.

Usage

# S4 method for class 'FLStock'
adjust(object)

Arguments

object

an FLStock object

Value

FLStock object

See also

harvest

Examples

data(ple4)
test <- adjust(ple4)
# Difference in catch due to estimation error
plot(FLStocks(PLE=ple4, TEST=test))