Method plot — plot • FLCore

Standard plot methods for every FLCore class. FLR plot methods are based on lattice, and attempt to show a general view of the object contents.

Usage

# S4 method for class 'FLQuant,missing'
plot(
  x,
  xlab = "year",
  ylab = paste("data (", units(x), ")", sep = ""),
  type = "p",
  ...
)

# S4 method for class 'FLStock,missing'
plot(x, auto.key = TRUE, ...)

# S4 method for class 'FLBiol,missing'
plot(x, y, ...)

# S4 method for class 'FLIndex,missing'
plot(x, type = c("splom"), ...)

# S4 method for class 'FLSR,missing'
plot(x, main = "Functional form", log.resid = FALSE, cex = 0.8)

# S4 method for class 'FLPar,missing'
plot(x, y = "missing", ...)

Details

Users are encouraged to write their own plotting code and make use of the overloaded lattice methods, for example xyplot or bwplot. See also lattice-FLCore.

Generic function

plot(x,y)

Author

The FLR Team

Examples


data(ple4)

# FLQuant
plot(catch.n(ple4)[, 1:20])

plot(catch.n(ple4)[, 1:20], type='b', pch=19, cex=0.5)


# FLStock
data(ple4sex)
plot(ple4)

plot(ple4sex)


# FLBiol
data(ple4.biol)
plot(ple4.biol)


# FLIndex
data(ple4.index)
plot(ple4.index)
#> Warning: coercing argument of type 'double' to logical


# FLSR
data(nsher)
plot(nsher)


# FLPar
fpa <- FLPar(a=rnorm(100, 1, 20), b=rlnorm(100, 0.5, 0.2))
plot(fpa)