create.indices.data function creates an FLIndices object
create.indices.data(yrs, ns, ni, stks.data)
Arguments
| yrs |
A vector with c(first.yr,proj.yr, last.yr) where
first.yr: First year of simulation (number). proj.yr: First year of projection (number). last.yr: Last year of projection (number). |
| ns |
Number of seasons (number). |
| ni |
Number of iterations (number). |
| stks.data |
A list with the names of the stocks with indices and the following elements:
stk.unit: Number of units of the stock (number). stk.age.min: Minimum age class of the stock (number). stk.age.max: Maximum age class of the stock (number). stk_indices: Name of indices for the stock 'stk' (vector). stk_ind_index.flq: Historical index data for index 'ind' of stock 'stk' (FLQuant). Optionals:
stk_ind_type: Type of index (character). stk_ind_distribution: Name of the statistical distribution of the 'ind' index values for stock 'stk' (character). stk_ind_index.var.flq: Variability in 'ind' index of stock 'stk' (FLQuant). stk_ind_index.q.flq: Catchability for 'ind' index of stock 'stk' (FLQuant). stk_ind_catch.n.flq: Catch at age in numbers for 'ind' index of stock 'stk'(FLQuant). stk_ind_catch.wt.flq: Mean weight at age in the catch for 'ind' index of stock 'stk' (FLQuant). stk_ind_effort.flq: Effort for 'ind' index of stock 'stk' (FLQuant). stk_ind_sel.pattern.flq: Selection pattern for 'ind' index of stock 'stk' (FLQuant). stk_ind_range.min: Minimum age in 'ind' index of stock 'stk' (number). stk_ind_range.max: Maximum age in 'ind' index of stock 'stk' (number). stk_ind_range.plusgroup: Plusgroup age in 'ind' index of stock 'stk' (number). stk_ind_range.minyear: First year with 'ind' index data of stock 'stk' (number). stk_ind_range.maxyear: Last year with 'ind' index data of stock 'stk' (number). stk_ind_range.startf: Minimum age for calculating average fishing mortality for 'ind' index of stock 'stk' (number). stk_ind_range.endf: Maximum age for calculating average fishing mortality for 'ind' index of stock 'stk' (number). |
Value
An FLIndices object.